CDS
| Accession Number | TCMCG018C29047 |
| gbkey | CDS |
| Protein Id | XP_031744299.1 |
| Location | join(25121552..25121872,25121996..25122068,25122238..25122397,25122488..25122617,25123679..25123753,25126314..25126503,25127079..25127277,25127373..25127460,25127628..25127768,25130219..25130305,25130404..25130475,25131379..25131485,25132109..25132257,25132357..25132579,25133009..25133234,25133677..25133822,25133950..25134115,25135130..25135268,25135376..25135539,25136024..25136257) |
| Gene | LOC101214455 |
| GeneID | 101214455 |
| Organism | Cucumis sativus |
Protein
| Length | 1029aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA182750 |
| db_source | XM_031888439.1 |
| Definition | probable RNA-dependent RNA polymerase 5 isoform X2 [Cucumis sativus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGCGTTTGCATTGTCGTATTCTATTGATGAACATACGGAACAGTGTACGCGGGAGGATAAAAGGAACTGTTTTTCAAAATGGGTTTTACAGGTATGCTGATTTGCTCTTGAGGAGAAGAAATTTGCATTGTTCTGCTTCAGCTTTTGCCATGGCTGATCATTTCTTGGAAGTTTCTCTTCCGCCTTCGGTTGAGCAGTTTCTTCTTCATATATGTAAGCTACATGATCAGCCACTGCCGGATACTGAAGTGCTACGGGCGTTAGCTTCAGTGGGGGAAGTAGCTGCTCTTGATGCCCTCCATAAGATCTCCTGTAGCACTCTTCAGAGTCCTTCAACTTGCTCTGTTTCTTTGCATCAAAGTCCTTCAACATTCTCTGTTTGTAGCGGCCAAGGGCTAGGAACTGCTGAGAATGCAAGCTTACAGCCACCAACTCCAGAAAAGTCTGGAAGCTTTTCATCTTCGGTTTTGGACAGAGCAAGGATTTCGCAATTTGTGGCTTTGGGAGAACTTGAGTTTAGAAAGGCATTTTTATTATTGAGTTACATTGGAGGAGAAAGCCTTGAAAGGGTCACAACAGCAGACCAAATTCAAAGTCTAAGCCAATTAACGATGGAAAAATTTGAGGACGAAGTTTGGAAAATATTTGGTAAAAAATATGTTACAAATGAAGAACGACGAGTGTATGTTGATTGGGATCGTAGGAAAACACACATTTACCACTGTCATGTTGCTTTGGATGGGAGTTGCAGGTTCAAGGGTCCCTTTTTGAACAATACAAAAACTCATCTGCAAAGGGTTTTAGGTGATGACAATGTTTTGATGGTCAAGTTTGCTGAAGACAAATCTGATACACCATTGTCAAACCATTCTGGTGGTTCCTTTTATGCTTATAGCAAGATTGCTAGAGATGGCATTCTTCTTGGATTGCGTCGATACCATTTTTTTGTTTTCAAAGATGGTGGGAAGGAGGAAAAAAAGAAGAATCCAACCACATCAGCTGTGAAGTGCTATTTTGTTCGAATGGAGTCAGATGCGTATATTGATAAGATTGAACCTTATAAATTATCAAATAGAACAGTTTTTGAAGCAAGGAGTCTTTTCATGCATGCACACATGGTGTCTAGTATAGCAAGCTACATGGCTAGGTTTTCACTCATTCTGTCGAAGACCATAAACCTGAAAATTGATTTGTCTACAGTAAATGTTCAAAGAATCGGGGATATACCCTGCAAGGATATCTATGGCAATGTCATATATAGAGATGGAAAACCTCTTATACATACTGACGGAACAGGATTTATATCAGAGGACTTGGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATGCTGATCTTAAGGCTATATGGCAGAGAATTCCTGCTTTTGAAGGATTTCAGAATAAGACTTTGCAACTAACACTTCCAGGACTTGAATTGCGAGAACCACCCTTGCTGATTCAGTTCCGACTTTTTTACAATGGCCTTGCTGTTAAGGGAACATTTCTATTGAATAAACAGCTTCCTCCTAGGACAATTCAAATCCGCGATTCTATGATCAAAGTTGAAATAGATCCAGATCTTGAAAATTTTGAAACAGAGAATTCACTGGAGTTAGTAGGGACCAGTAATCCCCCGAAGAGGACATTTCTTTCAAGAAATTTAATAGCACTGTTGAACTATGGAGGTGTCCCAAGAGAGTACTTCATGAATATCCTTGTGGATGCTTTAAAAGATGTTCAGGGTGTTTTCTCCAGTAAGCGTGCAGCTTTAAGAGTTTCCATTAACAATGGTGAAATGGATGACTTTCTAGTTGCAAGAATGATTTTAGCTGGCATTCCTCTTGATGAATCATATTTGCAATATCGGCTATCTGTGCTATTGAAGGAGGAGAAAAAGAGCTTGAAAAGCGGAAGACTTCACGTGCCTGAATGTTATTATTTAATGGGGACAGTCGATCCCACATTTACACTTGAAAGCGGCGAAGTCTGTGTTATCCTTGAGAATGGACAAATCAACGGGAAGGTTCTTGTTTATCGCAATCCTGGTCTACATTTTGGTGATATCCATGTTTTAACAGCTAAATATGTGGAGAAGTTAGTACCTGTTGTTGGAAATGCGAAATATGCCATATTCTTTTCCAGTAAGGGTCCCCGTTCAGTAGCTGATGAAATAGCAGGTGGTGATTTTGACGGTGATATGTACTGGGTTTCCAGAAATTCACAGTTGTTAGAGTATTTCAGACCATGTGAACCATGGAGGCCAAGTCCTTCAACTGAAGTAGTTACAAATAAAAAGCCGAAAGAATTTTCTGCCGACGAGTTGGAGAACGAGCTATTTAAACTGTTCTTGTCTACTAGGTTTCAGCCAAGTTATGCAAAGAGTGTTGCAGCTGATAACTGGTTGGCATTGATGGATCAGTTCCTAATGTTGGGTGAAGAGCGTAAAGAAGAAAGAAATTGTATAAGGGCTAAGATTCTGCAGTTGATCAATATATATTATGATGCTTTAGATGCACCTAAAAAAGGCGGGAAGAAGATTGAAGTTCCAAAACACCTGAAGGCAGGAACTTTACCTCATTTTATGGAAAGGGGAAAAAATTCATATGTTTCAACTTCAATTCTTGGACAAATTTTTGACACCGCTAACATGTATCAAGAAGAAGTGCCAAACATTGAGGTTCAAAAACTTCCTTGCTTTGAAGAGGAACTGCCCGAATATATCTTCATGAAGTGGAAGTTTCTCTATGAGTTGTATAGAAAAGACATGGTGGACGCCATGCAGCTCGATCCCGATGCCAAAAACATAGCTGCTGAAGCCACAATTAAGAAGTACAAGGAGATATTGTATGGTGCTGAAGAACTCGAGGGGAGCCCGAGGTCGAATGAGGAGGTTTACCAAGAGGCTCTTGCAATTTATCAAGTTACATATGACCATGCCATGAGCCGCAGTGTGCGCAATTGTGGCTTTGCATGGAAAGTTGCAGGTTCGGCTCTCTTCAAGCTTTATGCTATAAAACATTCTGAAAGAAGCTTTCATTGTCTTCCTTCAGTTATGCGTGAGATATTTAGGTAG |
| Protein: MRLHCRILLMNIRNSVRGRIKGTVFQNGFYRYADLLLRRRNLHCSASAFAMADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLRALASVGEVAALDALHKISCSTLQSPSTCSVSLHQSPSTFSVCSGQGLGTAENASLQPPTPEKSGSFSSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQEEVPNIEVQKLPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREIFR |